- GATB: Genome Analysis Tool Box that provides an easy way to develop efficient and fast NGS tools
- PLAST: a fast, accurate and NGS scalable bank-to-bank sequence similarity search tool providing significant accelerations of seeds-based heuristic comparison methods, such as the Blast suite of algorithms
- GenoFrag: a software to design primers optimized for whole genome scanning by long-range PCR amplification
- CCSA Constrained Consensus Sequence Algorithm