My current research interests are related to genomic data processing. More precisely, I develop new algorithms able to scale up with the fast growth of genomic data.
Relevant topics of interest:
- Next Generation Sequencing (NGS) data
- Intensive Sequence Comparison
- Parallelism, Processing-in-Memory
- DNA Storage
By the past, I developed several custom hardware accelerator dedicated to bioinformatics treatments (see hardware section)
In 2012, I created the GenScale bioinformatics group at IRISA / INRIA, Rennes.
GenScale web site.
In 2020, I started a new research axe: DNA Storage. See dnarXiv project