My current research interests are related to genomic data processing. More precisely, I develop new algorithms able to scale up with the fast growth of genomic data.

Relevant topics of interest:

  • Next Generation Sequencing (NGS) data
  • Intensive Sequence Comparison
  • Parallelism, Processing-in-Memory
  • DNA Storage

By the past, I developed several custom hardware accelerator dedicated to bioinformatics treatments (see hardware section)

In 2012, I created the GenScale bioinformatics group at IRISA / INRIA, Rennes.
GenScale web site.

In 2020, I started a new research axe: DNA Storage. See dnarXiv project

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